Protein ZmEREB178
ZmEREB178 is a protein in the AP2/ERF-ERF family.
Information
TF Name: ZmEREB178
Species: Maize
TF Family: AP2/ERF-ERF
Gene Name(Synonym): EREB178
Uniprot ID: A0A1D6PDQ1

Protein ZmEREB178

ZmEREB178 is a protein in the AP2/ERF-ERF family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00847
Zm00001eb242140_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d016623DAPseq no logo sequence fimo position
Zm00001d016623DAPseq no logo sequence fimo position
Zm00001d016623ChIPseq no logo sequence fimo position
Zm00001d016623PChIPseq no logo sequence fimo position

Interactions where ZmEREB178 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmEREB178 is the target  
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There are 86 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb242140_T001 from maize genome v5

Amino Acid Sequence
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MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00847
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Nucleotide Sequence
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ATGGACTTCTCCTACCTCTTCTCGT...

GRMZM2G047999_T01 from maize genome v3


Related TFome: pUT5959

Amino Acid Sequence
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MQQQQPLSLRLSALASTTATNNSLYSFSVCVLLCSCMDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRR
PWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRAARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYAN
NDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHVPVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCE
ASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPMFSPMPAADEVDGFQLGGPSSSSYYY

Nucleotide Sequence
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CCCGCCACTATATATACTCCTGCAT...

Zm00001d016623_T001 from maize genome v4

Amino Acid Sequence
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MDFSYLFSSSSSEKKSSKRLQQQQLLQQQDNNSNETRYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAIAYDRA
ARNIRGANARTNFAYPDLPPGSSVTPYLSPDLSADQLQHYYYANNDPVAPAADQPPTPACDQSAHGGAAGTEAYQYYHHV
PVEMMSSYGAAEGASVMDYGGNPEMGMYFEGNGSGGDDDRAWCEASSELLFGGYSDDAAAAPANASHGMYFEEGYVHSPM
FSPMPAADEVDGFQLGGPSSSSYYY

Nucleotide Sequence
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ATGGACTTCTCCTACCTCTTCTCGT...


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